3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03587

Details:

PFam ID : PF03587

PFam Domain Description : EMG1/NEP1 methyltransferase

Number of Sequence in 50% Dataset : 43

Number of Sequence in Full Dataset : 180

Average sequence length: 196.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03587	A7AMI9_BABBO_5_216	80.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03587	Q8TYU0_METKA_6_224	100

Sequence based PCA Plot of the family - PF03587 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=199 Length=8
Motif2 Start=59 Length=8
Motif3 Start=178 Length=8
Motif4 Start=101 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay