3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03563

Details:

PFam ID : PF03563

PFam Domain Description : Bunyavirus glycoprotein G2

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 41

Average sequence length: 182.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03563	D3JUZ6_BUNYW_1_157	90

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03563	GP_BUNGE_22_306	100

Sequence based PCA Plot of the family - PF03563 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=60 Length=11
Motif3 Start=80 Length=8
Motif4 Start=94 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay