3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03532

Details:

PFam ID : PF03532

PFam Domain Description : OMS28 porin

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 12

Average sequence length: 125.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03532	B0XC20_CULQU_15_94	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03532	Q0SLT3_BORAP_56_271	100

Sequence based PCA Plot of the family - PF03532 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay