3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03465

Details:

PFam ID : PF03465

PFam Domain Description : eRF1 domain 3

Number of Sequence in 50% Dataset : 78

Number of Sequence in Full Dataset : 498

Average sequence length: 114.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03465	E0VG16_PEDHC_122_170	90.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03465	E1EZY6_GIAIA_290_432	100

Sequence based PCA Plot of the family - PF03465 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay