3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03433

Details:

PFam ID : PF03433

PFam Domain Description : EspA-like secreted protein

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 42

Average sequence length: 161.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03433	F1T6L7_9ACTN_1_90	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03433	E3BEJ5_9VIBR_129_255	100

Sequence based PCA Plot of the family - PF03433 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay