3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03382

Details:

PFam ID : PF03382

PFam Domain Description : Mycoplasma protein of unknown function, DUF285

Number of Sequence in 50% Dataset : 197

Number of Sequence in Full Dataset : 1755

Average sequence length: 103.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03382	Q1VPV0_9FLAO_55_126	98.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03382	C7LLR3_MYCML_177_230	100

Sequence based PCA Plot of the family - PF03382 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=21 Length=14
Motif3 Start=81 Length=8
Motif4 Start=48 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay