3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03331

Details:

PFam ID : PF03331

PFam Domain Description : UDP-3-O-acyl N-acetylglycosamine deacetylase

Number of Sequence in 50% Dataset : 76

Number of Sequence in Full Dataset : 715

Average sequence length: 242.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03331	B5JHP4_9BACT_46_339	92

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03331	D0NHN5_PHYIT_1_307	100

Sequence based PCA Plot of the family - PF03331 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=103 Length=8
Motif2 Start=194 Length=11
Motif3 Start=79 Length=8
Motif4 Start=13 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay