3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03273

Details:

PFam ID : PF03273

PFam Domain Description : Baculovirus gp64 envelope glycoprotein family

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 16

Average sequence length: 346.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03273	D0QX27_9ORTO_1_329	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03273	ENV_DHVI1_22_520	100

Sequence based PCA Plot of the family - PF03273 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay