3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03203

Details:

PFam ID : PF03203

PFam Domain Description : MerC mercury resistance protein

Number of Sequence in 50% Dataset : 68

Number of Sequence in Full Dataset : 128

Average sequence length: 112.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03203	A6FXY8_9DELT_17_165	85.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03203	B7FU84_PHATC_96_235	100

Sequence based PCA Plot of the family - PF03203 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay