3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03112

Details:

PFam ID : PF03112

PFam Domain Description : Uncharacterized protein family (ORF7) DUF

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 27

Average sequence length: 128.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03112	D8UG66_VOLCA_1_57	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03112	Q9KKD1_BORHE_195_354	100

Sequence based PCA Plot of the family - PF03112 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay