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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02915
Details:

PFam ID : PF02915

PFam Domain Description : Rubrerythrin

Number of Sequence in 50% Dataset : 345

Number of Sequence in Full Dataset : 1541

Average sequence length: 117.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF02915D3U9W6_9ACTO_255_33699.4
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF02915B0TB96_HELMI_5_8399.6
Sequence based PCA Plot of the family - PF02915 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=27
Motif2 Start=34 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay