3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02831 Details: PFam ID : PF02831 PFam Domain Description : gpW Number of Sequence in 50% Dataset : 19 Number of Sequence in Full Dataset : 41 Average sequence length: 66.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02831D5RTG6_9PROT_10_8416.6 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02831Q73IA6_WOLPM_2_66100 Sequence based PCA Plot of the family - PF02831 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02831
PFam Domain Description : gpW
Number of Sequence in 50% Dataset : 19
Number of Sequence in Full Dataset : 41
Average sequence length: 66.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER