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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02814
Details:

PFam ID : PF02814

PFam Domain Description : UreE urease accessory protein, N-terminal domain

Number of Sequence in 50% Dataset : 48

Number of Sequence in Full Dataset : 376

Average sequence length: 63.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF02814Q7LZ15_CHICK_2_35No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF02814B7K910_CYAP7_18_8097.3
Sequence based PCA Plot of the family - PF02814 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=43 Length=8
Motif4 Start=54 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay