3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02799

Details:

PFam ID : PF02799

PFam Domain Description : Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

Number of Sequence in 50% Dataset : 31

Number of Sequence in Full Dataset : 178

Average sequence length: 183.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02799	A9BL23_HEMAN_195_352	76.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02799	E3JQE5_PUCGT_365_637	100

Sequence based PCA Plot of the family - PF02799 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=2 Length=8
Motif3 Start=100 Length=8
Motif4 Start=223 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay