3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02793

Details:

PFam ID : PF02793

PFam Domain Description : Hormone receptor domain

Number of Sequence in 50% Dataset : 75

Number of Sequence in Full Dataset : 387

Average sequence length: 64.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02793	A8PXQ3_MALGO_29_91	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02793	Q4SK63_TETNG_77_174	99.2

Sequence based PCA Plot of the family - PF02793 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=8 Length=39

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay