3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02791

Details:

PFam ID : PF02791

PFam Domain Description : DDT domain

Number of Sequence in 50% Dataset : 41

Number of Sequence in Full Dataset : 208

Average sequence length: 60.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02791	C0NWC0_AJECG_431_476	65

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02791	D8LRK0_ECTSI_398_469	99.5

Sequence based PCA Plot of the family - PF02791 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay