3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02761

Details:

PFam ID : PF02761

PFam Domain Description : CBL proto-oncogene N-terminus, EF hand-like domain

Number of Sequence in 50% Dataset : 11

Number of Sequence in Full Dataset : 43

Average sequence length: 73.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02761	A9UYU0_MONBE_164_213	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02761	E3X8X4_ANODA_103_166	97.6

Sequence based PCA Plot of the family - PF02761 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=31 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=22 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay