3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02757

Details:

PFam ID : PF02757

PFam Domain Description : YLP motif

Number of Sequence in 50% Dataset : 144

Number of Sequence in Full Dataset : 144

Average sequence length: 8.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02757	B4HMJ5_DROSE_173_189	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02757	Q29EC2_DROPS_149_157	86

Sequence based PCA Plot of the family - PF02757 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay