3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02756

Details:

PFam ID : PF02756

PFam Domain Description : GYR motif

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 47

Average sequence length: 17.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02756	B4HMJ5_DROSE_173_189	33.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02756	D3TKK7_GLOMM_278_295	100

Sequence based PCA Plot of the family - PF02756 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay