3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02755

Details:

PFam ID : PF02755

PFam Domain Description : RPEL repeat

Number of Sequence in 50% Dataset : 17

Number of Sequence in Full Dataset : 213

Average sequence length: 25.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02755	D5G7X3_TUBMM_21_44	87.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02755	D5G7X3_TUBMM_21_44	92.4

Sequence based PCA Plot of the family - PF02755 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay