3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02753

Details:

PFam ID : PF02753

PFam Domain Description : Gram-negative pili assembly chaperone, C-terminal domain

Number of Sequence in 50% Dataset : 248

Number of Sequence in Full Dataset : 775

Average sequence length: 66.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02753	D4BXU7_PRORE_168_214	98.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02753	D4XGM0_9BURK_175_254	100

Sequence based PCA Plot of the family - PF02753 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=5 Length=17
Motif2 Start=29 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay