3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02736

Details:

PFam ID : PF02736

PFam Domain Description : Myosin N-terminal SH3-like domain

Number of Sequence in 50% Dataset : 34

Number of Sequence in Full Dataset : 335

Average sequence length: 41.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02736	D2V5C1_NAEGR_42_79	96.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02736	E7R3X1_PICAD_10_53	98.5

Sequence based PCA Plot of the family - PF02736 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay