3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02724 Details: PFam ID : PF02724 PFam Domain Description : CDC45-like protein Number of Sequence in 50% Dataset : 89 Number of Sequence in Full Dataset : 190 Average sequence length: 476.2 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02724A0DEU0_PARTE_25_58169.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02724C5M8C9_CANTT_27_278100 Sequence based PCA Plot of the family - PF02724 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=10 Length=18Motif2 Start=1 Length=8Motif3 Start=75 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02724
PFam Domain Description : CDC45-like protein
Number of Sequence in 50% Dataset : 89
Number of Sequence in Full Dataset : 190
Average sequence length: 476.2
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER