3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02713

Details:

PFam ID : PF02713

PFam Domain Description : Domain of unknown function DUF220

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 37

Average sequence length: 65.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02713	VE4_HPV42_4_120	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02713	D7KNG2_ARALL_163_204	100

Sequence based PCA Plot of the family - PF02713 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay