3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02697

Details:

PFam ID : PF02697

PFam Domain Description : Uncharacterized ACR, COG1753

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 66

Average sequence length: 66.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02697	A7I935_METB6_7_64	4.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02697	D3T2E7_NATMM_3_76	100

Sequence based PCA Plot of the family - PF02697 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=19 Length=8
Motif3 Start=10 Length=8
Motif4 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay