3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02659

Details:

PFam ID : PF02659

PFam Domain Description : Domain of unknown function DUF

Number of Sequence in 50% Dataset : 121

Number of Sequence in Full Dataset : 985

Average sequence length: 66.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02659	B6W327_9BACE_1_32	27.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02659	A1HR91_9FIRM_13_94	95.0

Sequence based PCA Plot of the family - PF02659 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=17
Motif2 Start=30 Length=11
Motif3 Start=56 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay