3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02592

Details:

PFam ID : PF02592

PFam Domain Description : Uncharacterized ACR, YhhQ family COG1738

Number of Sequence in 50% Dataset : 91

Number of Sequence in Full Dataset : 632

Average sequence length: 145.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02592	B1ZTK1_OPITP_176_236	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02592	D5T6J0_LEGP2_51_198	100

Sequence based PCA Plot of the family - PF02592 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=89 Length=8
Motif2 Start=15 Length=21
Motif3 Start=1 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay