3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02583

Details:

PFam ID : PF02583

PFam Domain Description : Metal-sensitive transcriptional repressor

Number of Sequence in 50% Dataset : 45

Number of Sequence in Full Dataset : 1043

Average sequence length: 83.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02583	D8TW78_VOLCA_151_449	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02583	E6KUT4_9ACTO_1_100	100

Sequence based PCA Plot of the family - PF02583 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay