3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02560

Details:

PFam ID : PF02560

PFam Domain Description : Cyanate lyase C-terminal domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 139

Average sequence length: 72

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02560	F0VHK9_NEOCA_358_568	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02560	D8SNC7_SELML_74_141	100

Sequence based PCA Plot of the family - PF02560 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=6 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay