3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02508 Details: PFam ID : PF02508 PFam Domain Description : Rnf-Nqr subunit, membrane protein Number of Sequence in 50% Dataset : 45 Number of Sequence in Full Dataset : 1006 Average sequence length: 191.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02508Q1Q255_9BACT_268_471100 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02508D4LED9_9FIRM_2_197100 Sequence based PCA Plot of the family - PF02508 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=150 Length=8Motif2 Start=23 Length=8Motif3 Start=192 Length=8Motif4 Start=126 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02508
PFam Domain Description : Rnf-Nqr subunit, membrane protein
Number of Sequence in 50% Dataset : 45
Number of Sequence in Full Dataset : 1006
Average sequence length: 191.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER