3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02457

Details:

PFam ID : PF02457

PFam Domain Description : DisA bacterial checkpoint controller nucleotide-binding

Number of Sequence in 50% Dataset : 31

Number of Sequence in Full Dataset : 716

Average sequence length: 120.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02457	B7KIX2_CYAP7_174_305	76.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02457	A6GKI2_9DELT_112_236	100

Sequence based PCA Plot of the family - PF02457 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=107 Length=8
Motif2 Start=88 Length=8
Motif3 Start=56 Length=8
Motif4 Start=12 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay