3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02455

Details:

PFam ID : PF02455

PFam Domain Description : Hexon-associated protein (IIIa)

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 37

Average sequence length: 425.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02455	A9CB89_ADES1_58_615	63.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02455	E9KLA1_9ADEN_12_465	100

Sequence based PCA Plot of the family - PF02455 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay