3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02391

Details:

PFam ID : PF02391

PFam Domain Description : MoaE protein

Number of Sequence in 50% Dataset : 85

Number of Sequence in Full Dataset : 996

Average sequence length: 115.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02391	E5SCQ2_TRISP_77_149	77.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02391	A4S8U2_OSTLU_12_144	100

Sequence based PCA Plot of the family - PF02391 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=28 Length=17
Motif2 Start=1 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay