3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02381

Details:

PFam ID : PF02381

PFam Domain Description : MraZ protein

Number of Sequence in 50% Dataset : 113

Number of Sequence in Full Dataset : 1569

Average sequence length: 69.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02381	B1L4Q8_KORCO_1_79	96.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02381	E1QM95_DESB2_1_77	100

Sequence based PCA Plot of the family - PF02381 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=43 Length=8
Motif2 Start=10 Length=30

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay