3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02376 Details: PFam ID : PF02376 PFam Domain Description : CUT domain Number of Sequence in 50% Dataset : 34 Number of Sequence in Full Dataset : 180 Average sequence length: 83.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02376A7SHT3_NEMVE_42_12978.7 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02376O16218_CAEEL_133_241100 Sequence based PCA Plot of the family - PF02376 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 1 motifsMotif1 Start=1 Length=36 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02376
PFam Domain Description : CUT domain
Number of Sequence in 50% Dataset : 34
Number of Sequence in Full Dataset : 180
Average sequence length: 83.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER