3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02363

Details:

PFam ID : PF02363

PFam Domain Description : Cysteine rich repeat

Number of Sequence in 50% Dataset : 135

Number of Sequence in Full Dataset : 687

Average sequence length: 17.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02363	D7LCR3_ARALL_130_200	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02363	B0WRA0_CULQU_710_727	74

Sequence based PCA Plot of the family - PF02363 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay