3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02353

Details:

PFam ID : PF02353

PFam Domain Description : Mycolic acid cyclopropane synthetase

Number of Sequence in 50% Dataset : 121

Number of Sequence in Full Dataset : 1275

Average sequence length: 256.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02353	Q2LSG9_SYNAS_39_139	63.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02353	B0Z0K9_9MYCO_1_138	100

Sequence based PCA Plot of the family - PF02353 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=13 Length=8
Motif2 Start=53 Length=8
Motif3 Start=30 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay