3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02344

Details:

PFam ID : PF02344

PFam Domain Description : Myc leucine zipper domain

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 38

Average sequence length: 27.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02344	E3M9A0_CAERE_23_195	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02344	Q98T16_9PICI_139_159	97.2

Sequence based PCA Plot of the family - PF02344 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay