3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02323

Details:

PFam ID : PF02323

PFam Domain Description : Egg-laying hormone precursor

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 10

Average sequence length: 99

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02323	A6Q1A5_NITSB_9_356	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02323	ELH1_APLPA_1_254	100

Sequence based PCA Plot of the family - PF02323 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay