3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02287 Details: PFam ID : PF02287 PFam Domain Description : Dehydratase small subunit Number of Sequence in 50% Dataset : 2 Number of Sequence in Full Dataset : 59 Average sequence length: 132.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02287D2K9J1_LACRE_1_272No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02287E6TKK4_MYCSR_1_109100 Sequence based PCA Plot of the family - PF02287 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=10 Length=18Motif2 Start=1 Length=8Motif3 Start=63 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02287
PFam Domain Description : Dehydratase small subunit
Number of Sequence in 50% Dataset : 2
Number of Sequence in Full Dataset : 59
Average sequence length: 132.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER