3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02216

Details:

PFam ID : PF02216

PFam Domain Description : B domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 23

Average sequence length: 45.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02216	A9VBC1_MONBE_12_88	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02216	E3T5X0_STAHY_1_36	90.9

Sequence based PCA Plot of the family - PF02216 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay