3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02206

Details:

PFam ID : PF02206

PFam Domain Description : Domain of unknown function

Number of Sequence in 50% Dataset : 48

Number of Sequence in Full Dataset : 172

Average sequence length: 68.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02206	Q9NLD4_CAEEL_27_96	55.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02206	A8X898_CAEBR_28_103	100

Sequence based PCA Plot of the family - PF02206 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=13 Length=30

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay