3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02196

Details:

PFam ID : PF02196

PFam Domain Description : Raf-like Ras-binding domain

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 98

Average sequence length: 69.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02196	E9C1M5_9EUKA_278_349	63.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02196	Q6A1B3_ECHMU_130_201	100

Sequence based PCA Plot of the family - PF02196 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay