3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02157 Details: PFam ID : PF02157 PFam Domain Description : Mannose-6-phosphate receptor Number of Sequence in 50% Dataset : 27 Number of Sequence in Full Dataset : 77 Average sequence length: 150.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02157B3RRS8_TRIAD_112_23192.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF02157C3ZP88_BRAFL_119_264100 Sequence based PCA Plot of the family - PF02157 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=28 Length=8Motif2 Start=19 Length=8Motif3 Start=10 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF02157
PFam Domain Description : Mannose-6-phosphate receptor
Number of Sequence in 50% Dataset : 27
Number of Sequence in Full Dataset : 77
Average sequence length: 150.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER