3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02155

Details:

PFam ID : PF02155

PFam Domain Description : Glucocorticoid receptor

Number of Sequence in 50% Dataset : 18

Number of Sequence in Full Dataset : 43

Average sequence length: 280.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02155	Q5J7Z4_HORSE_1_153	11.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02155	Q2TU59_PIMPR_18_367	95.2

Sequence based PCA Plot of the family - PF02155 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay