3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02152

Details:

PFam ID : PF02152

PFam Domain Description : Dihydroneopterin aldolase

Number of Sequence in 50% Dataset : 191

Number of Sequence in Full Dataset : 1144

Average sequence length: 110.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02152	C0S3B2_PARBP_169_231	82.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02152	E9C0Y8_9EUKA_163_284	100

Sequence based PCA Plot of the family - PF02152 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=68 Length=8
Motif3 Start=46 Length=8
Motif4 Start=12 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay