3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02151

Details:

PFam ID : PF02151

PFam Domain Description : UvrB/uvrC motif

Number of Sequence in 50% Dataset : 18

Number of Sequence in Full Dataset : 3098

Average sequence length: 35.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02151	C6M359_NEISI_1_24	23.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02151	C6M359_NEISI_1_24	97.1

Sequence based PCA Plot of the family - PF02151 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=10 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay