3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02095

Details:

PFam ID : PF02095

PFam Domain Description : Extensin-like protein repeat

Number of Sequence in 50% Dataset : 69

Number of Sequence in Full Dataset : 69

Average sequence length: 9.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02095	F1NQW7_CHICK_12_151	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02095	PRP2_MEDTR_352_361	91.1

Sequence based PCA Plot of the family - PF02095 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay