3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02086

Details:

PFam ID : PF02086

PFam Domain Description : D12 class N6 adenine-specific DNA methyltransferase

Number of Sequence in 50% Dataset : 322

Number of Sequence in Full Dataset : 1336

Average sequence length: 229.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02086	E4LRR6_9CLOT_12_120	81.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02086	Q2SSU4_MYCCT_16_102	99.9

Sequence based PCA Plot of the family - PF02086 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=17
Motif2 Start=279 Length=11
Motif3 Start=355 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay