3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02083

Details:

PFam ID : PF02083

PFam Domain Description : Urotensin II

Number of Sequence in 50% Dataset : 17

Number of Sequence in Full Dataset : 17

Average sequence length: 11.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02083	C0LPA8_EPICO_118_129	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02083	C0LPA8_EPICO_118_129	100

Sequence based PCA Plot of the family - PF02083 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay